research 13
- Growth rate alterations of human colorectal cancer cells by 157 gut bacteria (Gut Microbes)
- Novel insights from the Plasmodium falciparum sporozoite-specific proteome by probabilistic integration of 26 studies (PLoS Computational Biology)
- Starvation responses impact interaction dynamics of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis (The ISME Journal)
- BCG-induced trained immunity enhances acellular pertussis vaccination responses in an explorative randomized clinical trial (NPJ Vaccines)
- Nutrition or nature - using elementary flux modes to disentangle the complex forces shaping prokaryote pan-genomes (BMC Ecology & Evolution)
- Metabolic models predict bacterial passengers in colorectal cancer (Cancer & Metabolism)
- Towards predicting the environmental metabolome from metagenomics with a mechanistic model (Nature Microbiology)
- miaSim - an R/Bioconductor package to easily simulate microbial community dynamics (Methods in Ecology and Evolution)
- A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology (mSphere)
- Elucidating genomic gaps using phenotypic profiles (F1000)
- Bacterial Oncotraits Rather than Spatial Organization Are Associated with Dysplasia in Ulcerative Colitis (Journal of Crohn's and Colitis)
- Optimized bacterial DNA isolation method for microbiome analysis of human tissues (MicrobiologyOpen)
- Improving genome-scale metabolic models of incomplete genomes with deep learning